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Cofit
Protein
Homologs
Top cofit genes for Psest_0217 from
Pseudomonas stutzeri RCH2
diguanylate cyclase (GGDEF) domain
SEED: GGDEF family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_2387
FolB domain
no
0.34
2
Psest
_4250
hypothetical protein
no
0.34
3
Psest
_4251
hypothetical protein
no
0.32
4
Psest
_4175
Flagellar motor switch/type III secretory pathway protein
no
0.32
5
Psest
_1041
Predicted membrane protein
no
0.31
6
Psest
_1072
TRAP transporter, DctM subunit
no
0.31
7
Psest
_4383
Site-specific recombinases, DNA invertase Pin homologs
no
0.30
8
Psest
_1423
PQQ-dependent dehydrogenase, methanol/ethanol family
no
0.30
9
Psest
_2657
acetate--CoA ligase
no
0.29
10
Psest
_4396
Site-specific recombinases, DNA invertase Pin homologs
no
0.29
11
Psest
_1098
Restriction endonuclease S subunits
no
0.29
12
Psest
_0386
Membrane protease subunits, stomatin/prohibitin homologs
no
0.28
13
Psest
_4136
TonB-dependent siderophore receptor
no
0.28
14
Psest
_1405
hypothetical protein
no
0.28
15
Psest
_0619
cation diffusion facilitator family transporter
no
0.28
16
Psest
_0315
hypothetical protein
no
0.28
17
Psest
_2411
PAS domain S-box
no
0.28
18
Psest
_3504
Predicted acyltransferases
no
0.28
19
Psest
_4215
hypothetical protein
no
0.28
20
Psest
_3469
Uncharacterized protein conserved in bacteria
no
0.28
Or look for
negative cofitness