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Cofit
Protein
Homologs
Top cofit genes for Psest_2156 from
Pseudomonas stutzeri RCH2
Glycosidases
SEED: Alpha-amylase (EC 3.2.1.1)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_1813
pseudaminic acid biosynthesis-associated protein PseG
no
0.36
2
Psest
_1812
pseudaminic acid CMP-transferase
no
0.35
3
Psest
_0864
maltose ABC transporter, permease component 1 (MalF)
(from data)
no
0.33
4
Psest
_4215
hypothetical protein
no
0.33
5
Psest
_1900
Maltoporin (phage lambda and maltose receptor)
no
0.32
6
Psest
_2158
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase
0.86
0.32
7
Psest
_0865
maltose ABC transporter, permease component 2 (MalG)
(from data)
no
0.32
8
Psest
_4251
hypothetical protein
no
0.32
9
Psest
_3656
ABC-type spermidine/putrescine transport system, permease component I
0.45
0.32
10
Psest
_4104
formate dehydrogenase, alpha subunit, proteobacterial-type
no
0.32
11
Psest
_4250
hypothetical protein
no
0.31
12
Psest
_0863
maltose ABC transporter, substrate-binding component MalE
(from data)
no
0.30
13
Psest
_1415
Restriction endonuclease
no
0.29
14
Psest
_1937
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
no
0.29
15
Psest
_1423
PQQ-dependent dehydrogenase, methanol/ethanol family
no
0.28
16
Psest
_0871
maltose ABC transporter, ATPase component MalK
(from data)
no
0.28
17
Psest
_0866
ATP-dependent transcriptional regulator
no
0.28
18
Psest
_3282
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
0.63
0.28
19
Psest
_1936
Response regulator with putative antiterminator output domain
no
0.28
20
Psest
_1550
conserved hypothetical protein
no
0.27
Or look for
negative cofitness