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Cofit
Protein
Homologs
Top cofit genes for Psest_2146 from
Pseudomonas stutzeri RCH2
Transcriptional regulator
SEED: Transcriptional regulator MexT
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_2144
The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
0.93
0.38
2
Psest
_2145
RND family efflux transporter, MFP subunit
0.92
0.31
3
Psest
_3469
Uncharacterized protein conserved in bacteria
no
0.30
4
Psest
_0783
PAS domain S-box
no
0.30
5
Psest
_2157
trehalose synthase
0.37
0.29
6
Psest
_1099
Type I restriction-modification system methyltransferase subunit
no
0.27
7
Psest
_0376
glucarate dehydratase
no
0.26
8
Psest
_1098
Restriction endonuclease S subunits
no
0.26
9
Psest
_1096
hypothetical protein
no
0.25
10
Psest
_1284
exodeoxyribonuclease VII, large subunit
0.59
0.25
11
Psest
_1100
Type I site-specific restriction-modification system, R (restriction) subunit and related helicases
no
0.25
12
Psest
_2226
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
no
0.25
13
Psest
_0371
hypothetical protein
no
0.25
14
Psest
_1072
TRAP transporter, DctM subunit
no
0.25
15
Psest
_2677
ABC-type multidrug transport system, ATPase and permease components
no
0.24
16
Psest
_2754
Sterol desaturase
no
0.23
17
Psest
_3017
Predicted phosphohydrolases
no
0.23
18
Psest
_2639
Protein of unknown function (DUF2489).
no
0.23
19
Psest
_0789
hypothetical protein
no
0.22
20
Psest
_4104
formate dehydrogenase, alpha subunit, proteobacterial-type
no
0.22
Or look for
negative cofitness