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Cofit
Protein
Homologs
Top cofit genes for Psest_2079 from
Pseudomonas stutzeri RCH2
Predicted permeases
SEED: FIG011065: hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_3178
formyltetrahydrofolate deformylase
no
0.46
2
Psest
_3931
Signal transduction histidine kinase, nitrogen specific
0.51
0.43
3
Psest
_2126
Transcriptional regulators
0.61
0.43
4
Psest
_3512
fumarylacetoacetate (FAA) hydrolase (EC 3.7.1.2)
(from data)
0.58
0.42
5
Psest
_2845
[Protein-PII] uridylyltransferase
0.33
0.42
6
Psest
_3710
glutamate synthase small subunit family protein, proteobacterial
0.66
0.40
7
Psest
_3711
Glutamate synthase domain 2
0.70
0.40
8
Psest
_3932
nitrogen regulation protein NR(I)
0.62
0.40
9
Psest
_2650
hypothetical protein
no
0.37
10
Psest
_3317
Phosphotransferase System HPr (HPr) Family
0.46
0.34
11
Psest
_4287
Predicted glutamine amidotransferases
0.28
0.33
12
Psest
_2680
transcriptional regulator, BolA protein family
0.21
0.33
13
Psest
_2612
hypothetical protein
no
0.33
14
Psest
_4282
spermidine/putrescine ABC transporter ATP-binding subunit
0.80
0.32
15
Psest
_1080
Acetyl/propionyl-CoA carboxylase, alpha subunit
no
0.32
16
Psest
_1815
pseudaminic acid synthase
no
0.31
17
Psest
_1079
Isopropylmalate/homocitrate/citramalate synthases
0.37
0.31
18
Psest
_0932
Transcriptional regulator
0.25
0.30
19
Psest
_4280
ABC-type spermidine/putrescine transport system, permease component II
0.79
0.30
20
Psest
_0411
biotin synthetase
0.54
0.30
Or look for
negative cofitness