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  • Top cofit genes for Psest_2079 from Pseudomonas stutzeri RCH2

    Predicted permeases
    SEED: FIG011065: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_3178 formyltetrahydrofolate deformylase no 0.46
    2 Psest_3931 Signal transduction histidine kinase, nitrogen specific 0.51 0.43
    3 Psest_2126 Transcriptional regulators 0.75 0.43
    4 Psest_3512 fumarylacetoacetate (FAA) hydrolase (EC 3.7.1.2) (from data) 0.58 0.42
    5 Psest_2845 [Protein-PII] uridylyltransferase 0.33 0.42
    6 Psest_3710 glutamate synthase small subunit family protein, proteobacterial 0.28 0.40
    7 Psest_3711 Glutamate synthase domain 2 0.31 0.40
    8 Psest_3932 nitrogen regulation protein NR(I) 0.62 0.40
    9 Psest_2650 hypothetical protein no 0.37
    10 Psest_3317 Phosphotransferase System HPr (HPr) Family 0.56 0.34
    11 Psest_4287 Predicted glutamine amidotransferases 0.36 0.33
    12 Psest_2680 transcriptional regulator, BolA protein family 0.56 0.33
    13 Psest_2612 hypothetical protein no 0.33
    14 Psest_4282 spermidine/putrescine ABC transporter ATP-binding subunit 0.80 0.32
    15 Psest_1080 Acetyl/propionyl-CoA carboxylase, alpha subunit no 0.32
    16 Psest_1815 pseudaminic acid synthase no 0.31
    17 Psest_1079 Isopropylmalate/homocitrate/citramalate synthases 0.37 0.31
    18 Psest_0932 Transcriptional regulator 0.25 0.30
    19 Psest_4280 ABC-type spermidine/putrescine transport system, permease component II 0.79 0.30
    20 Psest_0411 biotin synthetase 0.75 0.30

    Or look for negative cofitness