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  • Top cofit genes for Psest_0202 from Pseudomonas stutzeri RCH2

    diguanylate cyclase (GGDEF) domain
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
    KEGG: diguanylate cyclase

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_3469 Uncharacterized protein conserved in bacteria no 0.39
    2 Psest_1072 TRAP transporter, DctM subunit no 0.39
    3 Psest_3165 diguanylate cyclase (GGDEF) domain no 0.36
    4 Psest_3912 His Kinase A (phosphoacceptor) domain./HAMP domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. no 0.36
    5 Psest_3916 hypothetical protein no 0.35
    6 Psest_0394 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain no 0.34
    7 Psest_0404 phytoene desaturase no 0.34
    8 Psest_4215 hypothetical protein no 0.34
    9 Psest_1274 Endonuclease I no 0.33
    10 Psest_0386 Membrane protease subunits, stomatin/prohibitin homologs no 0.33
    11 Psest_4251 hypothetical protein no 0.32
    12 Psest_0578 hypothetical protein no 0.31
    13 Psest_0365 NAD dependent epimerase/dehydratase family. no 0.31
    14 Psest_4104 formate dehydrogenase, alpha subunit, proteobacterial-type no 0.30
    15 Psest_1098 Restriction endonuclease S subunits no 0.29
    16 Psest_4250 hypothetical protein no 0.29
    17 Psest_1096 hypothetical protein no 0.28
    18 Psest_4245 type IV / VI secretion system protein, DotU family no 0.28
    19 Psest_0570 hypothetical protein no 0.28
    20 Psest_0947 Phage integrase family. no 0.28

    Or look for negative cofitness