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Cofit
Protein
Homologs
Top cofit genes for Psest_2050 from
Pseudomonas stutzeri RCH2
Arabinose efflux permease
SEED: putative membrane protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_2441
hypothetical protein
no
0.34
2
Psest
_3472
Long-chain acyl-CoA synthetases (AMP-forming)
no
0.33
3
Psest
_3444
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
no
0.33
4
Psest
_2763
Cellobiose phosphorylase
no
0.32
5
Psest
_3974
Anti-sigma regulatory factor (Ser/Thr protein kinase)
no
0.32
6
Psest
_3241
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
no
0.29
7
Psest
_0638
Predicted lactoylglutathione lyase
no
0.29
8
Psest
_3976
PAS domain S-box
no
0.29
9
Psest
_3043
periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family
no
0.29
10
Psest
_2753
Uncharacterized protein conserved in bacteria
no
0.29
11
Psest
_0969
transcription elongation factor GreA
no
0.28
12
Psest
_0036
Predicted membrane protein
no
0.28
13
Psest
_3100
RNA polymerase sigma factor RpoE
no
0.27
14
Psest
_3966
Predicted thioesterase
no
0.27
15
Psest
_2551
1-aminocyclopropane-1-carboxylate deaminase
no
0.27
16
Psest
_4273
Lysophospholipase
0.53
0.27
17
Psest
_0788
Uncharacterized conserved protein
no
0.27
18
Psest
_2289
Nitric oxide reductase activation protein
no
0.26
19
Psest
_0101
Short-chain alcohol dehydrogenase of unknown specificity
no
0.26
20
Psest
_0056
Glutathione S-transferase
0.30
0.26
Or look for
negative cofitness