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Cofit
Protein
Homologs
Top cofit genes for Psest_0201 from
Pseudomonas stutzeri RCH2
PAS domain S-box
SEED: Aerotaxis sensor receptor protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_0090
phosphonate metabolism protein PhnM
no
0.44
2
Psest
_0110
malonate transporter, MadM subunit
no
0.40
3
Psest
_0381
hypothetical protein
no
0.39
4
Psest
_3903
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
no
0.39
5
Psest
_4246
type VI secretion protein IcmF
no
0.37
6
Psest
_4237
succinate-semialdehyde dehydrogenase
no
0.36
7
Psest
_3460
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
no
0.36
8
Psest
_0102
malonate decarboxylase, alpha subunit
no
0.35
9
Psest
_3696
Predicted thioesterase
no
0.34
10
Psest
_0226
Domain of unknown function (DUF3482)./GTPase of unknown function.
no
0.34
11
Psest
_2427
SH3 domain protein
no
0.34
12
Psest
_3699
Dehydrogenases (flavoproteins)
no
0.34
13
Psest
_4055
ABC transporter, substrate-binding protein, aliphatic sulfonates family
no
0.33
14
Psest
_3887
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit
no
0.33
15
Psest
_0382
Uncharacterized iron-regulated membrane protein
no
0.33
16
Psest
_3703
3-oxoacyl-(acyl-carrier-protein) reductase, putative
no
0.33
17
Psest
_1412
Protein of unknown function (DUF3047).
no
0.32
18
Psest
_3886
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit
no
0.31
19
Psest
_0360
Predicted permease, DMT superfamily
no
0.31
20
Psest
_0089
phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN
no
0.31
Or look for
negative cofitness