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  • Top cofit genes for Psest_0198 from Pseudomonas stutzeri RCH2

    TRAP transporter solute receptor, TAXI family
    SEED: TRAP transporter solute receptor, TAXI family precursor

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_0197 TRAP transporter, 4TM/12TM fusion protein 0.70 0.82
    2 Psest_4273 Lysophospholipase no 0.42
    3 Psest_2773 glycerol kinase no 0.40
    4 Psest_2772 MIP family channel proteins no 0.39
    5 Psest_0891 Uncharacterized protein conserved in bacteria no 0.36
    6 Psest_0771 Acyl-CoA hydrolase no 0.35
    7 Psest_3216 diguanylate cyclase (GGDEF) domain no 0.34
    8 Psest_2551 1-aminocyclopropane-1-carboxylate deaminase no 0.34
    9 Psest_0110 malonate transporter, MadM subunit no 0.33
    10 Psest_4246 type VI secretion protein IcmF no 0.33
    11 Psest_0098 phosphonate ABC transporter, permease protein PhnE no 0.33
    12 Psest_4274 hypothetical protein no 0.33
    13 Psest_0693 His Kinase A (phosphoacceptor) domain./PAS fold./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. no 0.32
    14 Psest_3976 PAS domain S-box no 0.31
    15 Psest_4008 PAS domain S-box no 0.31
    16 Psest_3217 PAS domain S-box no 0.31
    17 Psest_0717 Protein of unknown function (DUF1631). no 0.31
    18 Psest_0099 phosphonate ABC transporter, periplasmic phosphonate binding protein no 0.31
    19 Psest_0539 Acyl-CoA dehydrogenases no 0.31
    20 Psest_3100 RNA polymerase sigma factor RpoE no 0.31

    Or look for negative cofitness