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Cofit
Protein
Homologs
Top cofit genes for Psest_2011 from
Pseudomonas stutzeri RCH2
Predicted permease
SEED: Histidine permease YuiF
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_3578
Catalase
0.47
0.68
2
Psest
_0542
AMP nucleosidase
no
0.62
3
Psest
_3510
Na+-dependent transporters of the SNF family
no
0.48
4
Psest
_2682
fumarate hydratase, class II
no
0.47
5
Psest
_3118
endonuclease III
0.32
0.46
6
Psest
_3024
cytochrome d oxidase, subunit II (cydB)
no
0.42
7
Psest
_2636
tryptophan synthase, beta subunit
no
0.42
8
Psest
_1492
DNA-binding ferritin-like protein (oxidative damage protectant)
0.53
0.42
9
Psest
_3025
Cytochrome bd-type quinol oxidase, subunit 1
no
0.40
10
Psest
_2017
Predicted acyltransferase
no
0.39
11
Psest
_0397
Small-conductance mechanosensitive channel
0.36
0.39
12
Psest
_3172
cation diffusion facilitator family transporter
no
0.38
13
Psest
_0181
glycine cleavage system T protein
0.60
0.37
14
Psest
_0218
Acyl-CoA hydrolase
no
0.36
15
Psest
_2230
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
no
0.36
16
Psest
_4219
DNA polymerase I
0.55
0.36
17
Psest
_3575
Arabinose efflux permease
no
0.34
18
Psest
_1031
Uncharacterized protein conserved in bacteria
0.20
0.34
19
Psest
_0843
hypothetical protein
no
0.33
20
Psest
_2037
uroporphyrin-III C-methyltransferase
no
0.33
Or look for
negative cofitness