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  • Top cofit genes for Psest_1975 from Pseudomonas stutzeri RCH2

    Predicted transcriptional regulators
    SEED: Transcriptional regulator, MerR family

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_1241 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.75 0.43
    2 Psest_2935 hypothetical protein no 0.37
    3 Psest_1506 queuosine biosynthesis protein QueC 0.24 0.37
    4 Psest_2714 7-cyano-7-deazaguanine reductase 0.51 0.33
    5 Psest_1627 Superfamily II DNA and RNA helicases 0.58 0.30
    6 Psest_2946 septum site-determining protein MinD 0.52 0.30
    7 Psest_0691 ribonuclease R 0.67 0.29
    8 Psest_1041 Predicted membrane protein no 0.29
    9 Psest_1642 Uncharacterized protein conserved in bacteria 0.19 0.28
    10 Psest_3451 tRNA (uracil-5-)-methyltransferase 0.70 0.28
    11 Psest_0498 ribosome small subunit-dependent GTPase A no 0.28
    12 Psest_2632 ribosomal protein S12 methylthiotransferase RimO 0.54 0.27
    13 Psest_1415 Restriction endonuclease no 0.27
    14 Psest_2933 Signal transduction histidine kinase no 0.26
    15 Psest_2230 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes no 0.26
    16 Psest_1423 PQQ-dependent dehydrogenase, methanol/ethanol family no 0.26
    17 Psest_1143 Small-conductance mechanosensitive channel 0.62 0.26
    18 Psest_2339 transcription elongation factor GreB 0.71 0.25
    19 Psest_4393 Capsule polysaccharide export protein no 0.25
    20 Psest_2682 fumarate hydratase, class II 0.26 0.25

    Or look for negative cofitness