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Cofit
Protein
Homologs
Top cofit genes for Psest_1914 from
Pseudomonas stutzeri RCH2
Predicted permeases
SEED: putative membrane protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_2763
Cellobiose phosphorylase
0.36
0.33
2
Psest
_2915
Glucose/sorbosone dehydrogenases
no
0.30
3
Psest
_2914
membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family
no
0.30
4
Psest
_1932
nitrite extrusion protein (nitrite facilitator)
no
0.29
5
Psest
_2889
Predicted flavoprotein involved in K+ transport
no
0.29
6
Psest
_0635
ATP-dependent helicase HrpB
no
0.29
7
Psest
_2767
Uncharacterized conserved protein
no
0.28
8
Psest
_2666
Predicted acyl-CoA transferases/carnitine dehydratase
no
0.28
9
Psest
_2169
malto-oligosyltrehalose synthase
no
0.28
10
Psest
_1422
Carbohydrate-selective porin
0.13
0.28
11
Psest
_0539
Acyl-CoA dehydrogenases
0.30
0.28
12
Psest
_1394
Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
no
0.26
13
Psest
_1135
Protein of unknown function (DUF3182).
no
0.26
14
Psest
_1208
guanine deaminase
no
0.26
15
Psest
_3350
Diaminopimelate decarboxylase
no
0.26
16
Psest
_1365
Methyl-accepting chemotaxis protein
0.32
0.26
17
Psest
_0037
trehalose synthase, Pseudomonas stutzeri type
no
0.26
18
Psest
_1579
Pirin-related protein
0.49
0.26
19
Psest
_0373
L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
no
0.26
20
Psest
_2157
trehalose synthase
no
0.25
Or look for
negative cofitness