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  • Top cofit genes for Psest_0188 from Pseudomonas stutzeri RCH2

    diguanylate cyclase (GGDEF) domain
    SEED: GGDEF domain protein
    KEGG: diguanylate cyclase

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_0378 Lactate dehydrogenase and related dehydrogenases 0.38 0.25
    2 Psest_2105 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain no 0.24
    3 Psest_3157 hypothetical protein no 0.23
    4 Psest_0210 Na/Pi-cotransporter 0.27 0.23
    5 Psest_0090 phosphonate metabolism protein PhnM no 0.22
    6 Psest_4237 succinate-semialdehyde dehydrogenase no 0.22
    7 Psest_2643 Beta-glucosidase-related glycosidases no 0.21
    8 Psest_1841 lipid kinase YegS no 0.21
    9 Psest_4246 type VI secretion protein IcmF no 0.21
    10 Psest_0382 Uncharacterized iron-regulated membrane protein no 0.20
    11 Psest_0891 Uncharacterized protein conserved in bacteria no 0.20
    12 Psest_4301 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain no 0.20
    13 Psest_0638 Predicted lactoylglutathione lyase no 0.20
    14 Psest_2900 hypothetical protein no 0.20
    15 Psest_1441 Curlin associated repeat. no 0.20
    16 Psest_0539 Acyl-CoA dehydrogenases no 0.20
    17 Psest_2353 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) no 0.19
    18 Psest_1537 Bacterioferritin-associated ferredoxin 0.46 0.19
    19 Psest_4244 type VI secretion protein, VC_A0114 family no 0.19
    20 Psest_0105 malonate decarboxylase, beta subunit 0.51 0.19

    Or look for negative cofitness