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Cofit
Protein
Homologs
Top cofit genes for Psest_1880 from
Pseudomonas stutzeri RCH2
Predicted Fe-S-cluster oxidoreductase
SEED: Ferredoxin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_1571
cytochrome c oxidase accessory protein FixG
no
0.34
2
Psest
_3196
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
no
0.31
3
Psest
_3086
hypothetical protein
no
0.30
4
Psest
_2914
membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family
no
0.30
5
Psest
_0345
Uncharacterized protein conserved in archaea
0.56
0.30
6
Psest
_4299
diguanylate cyclase (GGDEF) domain
no
0.30
7
Psest
_1560
hypothetical protein
0.37
0.29
8
Psest
_0731
Serine/threonine protein kinase involved in cell cycle control
0.54
0.29
9
Psest
_2169
malto-oligosyltrehalose synthase
no
0.29
10
Psest
_3003
Transcriptional regulator
no
0.28
11
Psest
_3445
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
no
0.28
12
Psest
_3224
16S RNA G1207 methylase RsmC
no
0.27
13
Psest
_2387
FolB domain
0.20
0.27
14
Psest
_1209
xanthine dehydrogenase accessory protein XdhC
no
0.27
15
Psest
_0287
probable DNA metabolism protein
no
0.27
16
Psest
_3876
Predicted permease
no
0.27
17
Psest
_4391
ATPases involved in chromosome partitioning
no
0.26
18
Psest
_3830
Acyl-CoA dehydrogenases
no
0.25
19
Psest
_2930
asparagine synthase (glutamine-hydrolyzing)
no
0.25
20
Psest
_0150
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
no
0.25
Or look for
negative cofitness