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  • Top cofit genes for Psest_1804 from Pseudomonas stutzeri RCH2

    Superfamily II DNA and RNA helicases
    SEED: DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13)
    KEGG: ATP-dependent RNA helicase DeaD

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_0696 hypothetical protein no 0.47
    2 Psest_2018 Uncharacterized conserved protein 0.71 0.47
    3 Psest_0247 NAD-dependent aldehyde dehydrogenases no 0.47
    4 Psest_3212 FKBP-type peptidyl-prolyl cis-trans isomerases 2 0.68 0.45
    5 Psest_3296 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 0.44 0.45
    6 Psest_0358 Neutral trehalase 0.32 0.43
    7 Psest_0056 Glutathione S-transferase no 0.43
    8 Psest_3976 PAS domain S-box no 0.42
    9 Psest_3351 peptide chain release factor 3 0.62 0.42
    10 Psest_0923 Glutaredoxin, GrxC family no 0.42
    11 Psest_4150 fagellar hook-basal body proteins 0.50 0.41
    12 Psest_0446 hypothetical protein no 0.41
    13 Psest_3216 diguanylate cyclase (GGDEF) domain no 0.41
    14 Psest_1725 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.21 0.41
    15 Psest_2441 hypothetical protein no 0.40
    16 Psest_3100 RNA polymerase sigma factor RpoE 0.43 0.40
    17 Psest_3444 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 0.67 0.40
    18 Psest_2900 hypothetical protein no 0.39
    19 Psest_3538 hypothetical protein no 0.39
    20 Psest_0507 Uncharacterized membrane-associated protein 0.40 0.39

    Or look for negative cofitness