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  • Top cofit genes for Psest_1802 from Pseudomonas stutzeri RCH2

    Spermidine synthase
    SEED: Spermidine synthase (EC 2.5.1.16)

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_0297 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain no 0.23
    2 Psest_1334 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 0.27 0.23
    3 Psest_2691 benzoate transporter no 0.22
    4 Psest_2516 cytochrome c oxidase, subunit I no 0.22
    5 Psest_1571 cytochrome c oxidase accessory protein FixG no 0.21
    6 Psest_0681 DNA mismatch repair protein MutL no 0.20
    7 Psest_2939 Predicted membrane protein no 0.20
    8 Psest_2673 Arabinose efflux permease 0.46 0.20
    9 Psest_3806 Phosphomannomutase no 0.20
    10 Psest_3288 type IV-A pilus assembly ATPase PilB no 0.19
    11 Psest_1260 type IV pilus biogenesis/stability protein PilW no 0.19
    12 Psest_0491 PAS domain S-box/diguanylate cyclase (GGDEF) domain no 0.19
    13 Psest_0443 methionine-S-sulfoxide reductase no 0.19
    14 Psest_3809 hypothetical protein no 0.19
    15 Psest_2518 Predicted membrane protein no 0.18
    16 Psest_3969 3-hydroxyacyl-CoA dehydrogenase no 0.18
    17 Psest_2576 hypothetical protein no 0.18
    18 Psest_1488 outer membrane porin, OprD family. 0.46 0.18
    19 Psest_3390 FKBP-type peptidyl-prolyl cis-trans isomerases 1 no 0.18
    20 Psest_3198 Putative hemolysin no 0.18

    Or look for negative cofitness