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Cofit
Protein
Homologs
Top cofit genes for Psest_1802 from
Pseudomonas stutzeri RCH2
Spermidine synthase
SEED: Spermidine synthase (EC 2.5.1.16)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_0297
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
no
0.23
2
Psest
_1334
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
no
0.23
3
Psest
_2691
benzoate transporter
no
0.22
4
Psest
_2516
cytochrome c oxidase, subunit I
no
0.22
5
Psest
_1571
cytochrome c oxidase accessory protein FixG
no
0.21
6
Psest
_0681
DNA mismatch repair protein MutL
0.27
0.20
7
Psest
_2939
Predicted membrane protein
no
0.20
8
Psest
_2673
Arabinose efflux permease
no
0.20
9
Psest
_3806
Phosphomannomutase
no
0.20
10
Psest
_3288
type IV-A pilus assembly ATPase PilB
0.32
0.19
11
Psest
_1260
type IV pilus biogenesis/stability protein PilW
0.36
0.19
12
Psest
_0491
PAS domain S-box/diguanylate cyclase (GGDEF) domain
no
0.19
13
Psest
_0443
methionine-S-sulfoxide reductase
0.26
0.19
14
Psest
_3809
hypothetical protein
no
0.19
15
Psest
_2518
Predicted membrane protein
no
0.18
16
Psest
_3969
3-hydroxyacyl-CoA dehydrogenase
no
0.18
17
Psest
_2576
hypothetical protein
0.54
0.18
18
Psest
_1488
outer membrane porin, OprD family.
0.46
0.18
19
Psest
_3390
FKBP-type peptidyl-prolyl cis-trans isomerases 1
no
0.18
20
Psest
_3198
Putative hemolysin
no
0.18
Or look for
negative cofitness