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  • Top cofit genes for Psest_1712 from Pseudomonas stutzeri RCH2

    PAS domain S-box/diguanylate cyclase (GGDEF) domain
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_0927 zinc-binding alcohol dehydrogenase family protein no 0.38
    2 Psest_1841 lipid kinase YegS no 0.36
    3 Psest_0923 Glutaredoxin, GrxC family no 0.35
    4 Psest_2816 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase no 0.34
    5 Psest_0270 carbamate kinase no 0.31
    6 Psest_3397 Cytochrome c peroxidase no 0.31
    7 Psest_3157 hypothetical protein no 0.31
    8 Psest_3577 Predicted carboxypeptidase no 0.29
    9 Psest_0931 putative quinone oxidoreductase, YhdH/YhfP family 0.53 0.28
    10 Psest_1246 Predicted outer membrane lipoprotein no 0.28
    11 Psest_2793 hypothetical protein no 0.28
    12 Psest_1842 Chemotaxis signal transduction protein no 0.28
    13 Psest_1088 outer membrane porin, OprD family. no 0.27
    14 Psest_2105 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain no 0.27
    15 Psest_1324 Arabinose efflux permease no 0.27
    16 Psest_2289 Nitric oxide reductase activation protein no 0.27
    17 Psest_0692 rRNA methylase, putative, group 3 0.14 0.26
    18 Psest_2728 Acyl-CoA dehydrogenases no 0.26
    19 Psest_3434 Serine phosphatase RsbU, regulator of sigma subunit no 0.26
    20 Psest_1846 hypothetical protein no 0.26

    Or look for negative cofitness