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  • Top cofit genes for Psest_1565 from Pseudomonas stutzeri RCH2

    RND family efflux transporter, MFP subunit
    SEED: RND efflux membrane fusion protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_1566 Cation/multidrug efflux pump 0.93 0.34
    2 Psest_3015 hypothetical protein no 0.22
    3 Psest_4315 ABC-type metal ion transport system, permease component no 0.20
    4 Psest_1183 hydroxyisourate hydrolase no 0.19
    5 Psest_3199 1-acyl-sn-glycerol-3-phosphate acyltransferase no 0.18
    6 Psest_4341 hypothetical protein no 0.18
    7 Psest_2072 Methyltransferase domain. 0.60 0.18
    8 Psest_0252 hypothetical protein no 0.18
    9 Psest_0345 Uncharacterized protein conserved in archaea 0.15 0.18
    10 Psest_1367 hypothetical protein no 0.18
    11 Psest_0787 tripartite ATP-independent periplasmic transporter solute receptor, DctP family no 0.17
    12 Psest_1875 Adenylate cyclase, family 3 (some proteins contain HAMP domain) 0.20 0.17
    13 Psest_4260 ABC-type multidrug transport system, ATPase component 0.18 0.17
    14 Psest_3367 translation initation factor SUI1, putative, prokaryotic no 0.17
    15 Psest_2614 Predicted glycosyltransferases no 0.16
    16 Psest_3743 Regulator of sigma D no 0.16
    17 Psest_4044 type I site-specific deoxyribonuclease, HsdR family no 0.16
    18 Psest_1327 Superfamily II DNA/RNA helicases, SNF2 family no 0.16
    19 Psest_2482 Predicted metal-dependent hydrolase of the TIM-barrel fold no 0.16
    20 Psest_0416 hypothetical protein no 0.16

    Or look for negative cofitness