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  • Top cofit genes for Psest_1544 from Pseudomonas stutzeri RCH2

    single-stranded-DNA-specific exonuclease RecJ
    SEED: Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)
    KEGG: single-stranded-DNA-specific exonuclease

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_1869 ATP-dependent DNA helicase RecQ 0.91 0.51
    2 Psest_3090 DNA repair protein RecO 0.75 0.48
    3 Psest_3576 excinuclease ABC, A subunit 0.82 0.44
    4 Psest_2236 Rad3-related DNA helicases 0.51 0.43
    5 Psest_0004 recF protein 0.87 0.43
    6 Psest_2259 excinuclease ABC, C subunit 0.83 0.42
    7 Psest_2545 recombination protein RecR 0.84 0.40
    8 Psest_1296 excinuclease ABC, B subunit 0.77 0.40
    9 Psest_2235 DNA damage response nuclease (from data) 0.53 0.39
    10 Psest_0962 DNA repair protein RecN 0.77 0.38
    11 Psest_3180 Exonuclease I 0.74 0.34
    12 Psest_4391 ATPases involved in chromosome partitioning 0.27 0.33
    13 Psest_4097 PAS domain S-box/diguanylate cyclase (GGDEF) domain no 0.29
    14 Psest_3401 DNA repair protein RadA 0.82 0.27
    15 Psest_2875 DNA mismatch repair protein MutS 0.46 0.27
    16 Psest_1747 ATPases involved in chromosome partitioning 0.40 0.27
    17 Psest_1221 Uncharacterized conserved protein no 0.27
    18 Psest_3691 Predicted membrane protein 0.32 0.27
    19 Psest_2518 Predicted membrane protein no 0.27
    20 Psest_0172 Uncharacterized protein conserved in bacteria 0.28 0.27

    Or look for negative cofitness