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  • Top cofit genes for Psest_1491 from Pseudomonas stutzeri RCH2

    Cold shock proteins
    SEED: Cold shock protein CspC
    KEGG: cold shock protein (beta-ribbon, CspA family)

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_2011 Predicted permease 0.33 0.30
    2 Psest_3578 Catalase 0.53 0.29
    3 Psest_0028 Coproporphyrinogen III oxidase no 0.28
    4 Psest_0542 AMP nucleosidase no 0.27
    5 Psest_2979 sodium ion-translocating decarboxylase, beta subunit no 0.26
    6 Psest_1246 Predicted outer membrane lipoprotein no 0.26
    7 Psest_4078 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D no 0.25
    8 Psest_0697 ribosomal protein L9 0.35 0.25
    9 Psest_3172 cation diffusion facilitator family transporter no 0.24
    10 Psest_2814 NADH:flavin oxidoreductases, Old Yellow Enzyme family no 0.24
    11 Psest_4320 Zn-dependent oligopeptidases no 0.24
    12 Psest_1103 GTP-binding protein YchF 0.54 0.23
    13 Psest_3118 endonuclease III 0.32 0.22
    14 Psest_1339 ATP-dependent helicase HrpA 0.22 0.22
    15 Psest_2072 Methyltransferase domain. 0.43 0.22
    16 Psest_3678 acyl-phosphate glycerol 3-phosphate acyltransferase no 0.21
    17 Psest_4044 type I site-specific deoxyribonuclease, HsdR family no 0.21
    18 Psest_2269 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases no 0.21
    19 Psest_3926 GTP-binding protein TypA/BipA no 0.21
    20 Psest_0969 transcription elongation factor GreA 0.48 0.21

    Or look for negative cofitness