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Cofit
Protein
Homologs
Top cofit genes for Psest_1467 from
Pseudomonas stutzeri RCH2
Thioredoxin.
SEED: Possible periplasmic thiredoxin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_3165
diguanylate cyclase (GGDEF) domain
no
0.33
2
Psest
_1274
Endonuclease I
no
0.30
3
Psest
_0711
ATP-dependent chaperone ClpB
no
0.26
4
Psest
_1482
hypothetical protein
no
0.26
5
Psest
_2540
Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems
no
0.25
6
Psest
_0703
diguanylate cyclase (GGDEF) domain
no
0.25
7
Psest
_0202
diguanylate cyclase (GGDEF) domain
no
0.24
8
Psest
_0930
Nitroreductase
no
0.24
9
Psest
_1470
succinyldiaminopimelate transaminase
no
0.23
10
Psest
_1481
Predicted membrane protein
no
0.23
11
Psest
_3166
Superfamily II DNA and RNA helicases
no
0.23
12
Psest
_0440
hypothetical protein
no
0.23
13
Psest
_0700
diguanylate cyclase (GGDEF) domain
no
0.22
14
Psest
_0196
Uncharacterized membrane protein, required for spore maturation in B.subtilis.
no
0.22
15
Psest
_4047
Restriction endonuclease S subunits
no
0.22
16
Psest
_3407
Type I site-specific restriction-modification system, R (restriction) subunit and related helicases
no
0.22
17
Psest
_0434
hypothetical protein
no
0.21
18
Psest
_1246
Predicted outer membrane lipoprotein
no
0.21
19
Psest
_0598
Outer membrane protein
no
0.21
20
Psest
_1312
ABC-type branched-chain amino acid transport systems, periplasmic component
no
0.21
Or look for
negative cofitness