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Cofit
Protein
Homologs
Top cofit genes for Psest_1424 from
Pseudomonas stutzeri RCH2
Lipoate-protein ligase A
SEED: Lipoate-protein ligase A
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_0380
TonB-dependent siderophore receptor
no
0.27
2
Psest
_2623
Flp pilus assembly protein TadG
no
0.27
3
Psest
_0210
Na/Pi-cotransporter
0.24
0.26
4
Psest
_0403
lycopene cyclase
no
0.26
5
Psest
_1248
RNA methyltransferase, TrmH family, group 1
no
0.25
6
Psest
_3112
electron transport complex, RnfABCDGE type, A subunit
no
0.25
7
Psest
_2669
Acyl-CoA dehydrogenases
no
0.24
8
Psest
_3114
electron transport complex, RnfABCDGE type, C subunit
0.18
0.24
9
Psest
_3762
iron donor protein CyaY
0.23
0.24
10
Psest
_0089
phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN
no
0.24
11
Psest
_0406
Fatty acid hydroxylase superfamily.
no
0.24
12
Psest
_0959
Uncharacterized protein conserved in bacteria
no
0.23
13
Psest
_1511
Predicted redox protein, regulator of disulfide bond formation
no
0.23
14
Psest
_1115
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
0.47
0.23
15
Psest
_4239
Cytochrome b
no
0.23
16
Psest
_3012
cob(II)yrinic acid a,c-diamide reductase
0.27
0.23
17
Psest
_1213
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
no
0.22
18
Psest
_2621
TadE-like protein.
no
0.22
19
Psest
_4136
TonB-dependent siderophore receptor
no
0.22
20
Psest
_0667
Phosphodiesterase/alkaline phosphatase D
0.45
0.21
Or look for
negative cofitness