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  • Top cofit genes for Psest_1390 from Pseudomonas stutzeri RCH2

    Uncharacterized ABC-type transport system, permease component
    SEED: Nucleoside ABC transporter, permease protein 2
    KEGG: simple sugar transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_3086 hypothetical protein no 0.30
    2 Psest_2927 probable methyltransferase no 0.30
    3 Psest_2362 Zn-dependent hydrolases, including glyoxylases no 0.29
    4 Psest_0840 anaerobic ribonucleoside-triphosphate reductase no 0.29
    5 Psest_1356 Predicted periplasmic protein no 0.28
    6 Psest_3003 Transcriptional regulator 0.17 0.26
    7 Psest_2915 Glucose/sorbosone dehydrogenases no 0.25
    8 Psest_1539 Mn2+ and Fe2+ transporters of the NRAMP family no 0.25
    9 Psest_0231 phosphoesterase, MJ0936 family no 0.25
    10 Psest_1542 Uncharacterized proteins, homologs of lactam utilization protein B no 0.24
    11 Psest_1584 Arabinose efflux permease no 0.24
    12 Psest_3204 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) no 0.24
    13 Psest_2888 Transcriptional activator of acetoin/glycerol metabolism no 0.24
    14 Psest_0052 hypothetical protein no 0.23
    15 Psest_2169 malto-oligosyltrehalose synthase no 0.23
    16 Psest_0670 ethanolamine permease no 0.23
    17 Psest_0242 gamma-glutamyltranspeptidase no 0.23
    18 Psest_3525 Formamidopyrimidine-DNA glycosylase no 0.23
    19 Psest_2121 Predicted ATPase no 0.22
    20 Psest_1056 2-isopropylmalate synthase, bacterial type 0.64 0.22

    Or look for negative cofitness