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  • Top cofit genes for Psest_1380 from Pseudomonas stutzeri RCH2

    Di- and tricarboxylate transporters
    SEED: TrkA-C domain protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_0752 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain no 0.40
    2 Psest_0110 malonate transporter, MadM subunit no 0.36
    3 Psest_3538 hypothetical protein no 0.35
    4 Psest_3444 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs no 0.35
    5 Psest_0762 Glucose/sorbosone dehydrogenases no 0.34
    6 Psest_0539 Acyl-CoA dehydrogenases no 0.34
    7 Psest_3472 Long-chain acyl-CoA synthetases (AMP-forming) no 0.34
    8 Psest_1935 hypothetical protein no 0.33
    9 Psest_0228 Glycerophosphoryl diester phosphodiesterase no 0.33
    10 Psest_2106 diguanylate cyclase (GGDEF) domain no 0.32
    11 Psest_1412 Protein of unknown function (DUF3047). no 0.32
    12 Psest_3468 hypothetical protein no 0.32
    13 Psest_1430 Choline dehydrogenase and related flavoproteins no 0.31
    14 Psest_3901 diguanylate cyclase (GGDEF) domain no 0.31
    15 Psest_2532 Uncharacterized protein conserved in bacteria no 0.31
    16 Psest_0210 Na/Pi-cotransporter no 0.31
    17 Psest_2127 Transcriptional regulator 0.46 0.31
    18 Psest_0358 Neutral trehalase no 0.31
    19 Psest_4246 type VI secretion protein IcmF no 0.31
    20 Psest_3976 PAS domain S-box no 0.31

    Or look for negative cofitness