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Cofit
Protein
Homologs
Top cofit genes for Psest_1154 from
Pseudomonas stutzeri RCH2
RND family efflux transporter, MFP subunit
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_1153
Cation/multidrug efflux pump
0.99
0.96
2
Psest
_0476
type I secretion outer membrane protein, TolC family
0.84
0.83
3
Psest
_3929
hypothetical protein
no
0.77
4
Psest
_4213
hypothetical protein
no
0.48
5
Psest
_2712
Surface lipoprotein
0.62
0.38
6
Psest
_1939
Tetratricopeptide repeat.
0.90
0.37
7
Psest
_1217
Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein
0.93
0.35
8
Psest
_0301
Methylase of chemotaxis methyl-accepting proteins
no
0.34
9
Psest
_1922
aminopeptidase N, Escherichia coli type
no
0.34
10
Psest
_0024
LysM domain.
0.73
0.34
11
Psest
_1938
hypothetical protein
0.94
0.32
12
Psest
_1942
Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
0.81
0.32
13
Psest
_1943
MoxR-like ATPases
0.94
0.32
14
Psest
_1048
Uncharacterized paraquat-inducible protein A
0.35
0.32
15
Psest
_3189
hypothetical protein
no
0.32
16
Psest
_3303
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
no
0.32
17
Psest
_3306
conserved hypothetical integral membrane protein
0.81
0.31
18
Psest
_3019
Cell wall-associated hydrolases (invasion-associated proteins)
no
0.31
19
Psest
_1050
Paraquat-inducible protein B
0.36
0.31
20
Psest
_1122
putative adhesin (DUF1302)
(from data)
0.42
0.31
Or look for
negative cofitness