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  • Top cofit genes for Psest_1141 from Pseudomonas stutzeri RCH2

    diguanylate cyclase (GGDEF) domain
    SEED: COG3706: Response regulator containing a CheY-like receiver domain and a GGDEF domain

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_1140 2-dehydropantoate 2-reductase 0.83 0.41
    2 Psest_3678 acyl-phosphate glycerol 3-phosphate acyltransferase no 0.32
    3 Psest_0771 Acyl-CoA hydrolase no 0.31
    4 Psest_4003 TIGR00153 family protein no 0.29
    5 Psest_2673 Arabinose efflux permease no 0.27
    6 Psest_0457 Lipopolysaccharide kinase (Kdo/WaaP) family. no 0.26
    7 Psest_1890 Uncharacterized conserved protein no 0.24
    8 Psest_0408 Protein involved in catabolism of external DNA no 0.23
    9 Psest_2102 5-methyltetrahydrofolate--homocysteine methyltransferase no 0.23
    10 Psest_1484 Thiol-disulfide isomerase and thioredoxins no 0.23
    11 Psest_3344 ABC-type Co2+ transport system, periplasmic component no 0.23
    12 Psest_0335 Methylase involved in ubiquinone/menaquinone biosynthesis no 0.23
    13 Psest_2072 Methyltransferase domain. no 0.23
    14 Psest_2980 oxaloacetate decarboxylase alpha subunit no 0.23
    15 Psest_1723 flagellar export protein FliJ 0.49 0.22
    16 Psest_4337 TonB-dependent siderophore receptor no 0.22
    17 Psest_0459 Predicted carbamoyl transferase, NodU family no 0.21
    18 Psest_4273 Lysophospholipase no 0.21
    19 Psest_3044 deoxycytidine triphosphate deaminase no 0.21
    20 Psest_4140 Acyl-CoA dehydrogenases no 0.21

    Or look for negative cofitness