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Cofit
Protein
Homologs
Top cofit genes for Psest_1068 from
Pseudomonas stutzeri RCH2
outer membrane porin, OprD family.
SEED: Probable porin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_0648
Lysine/ornithine N-monooxygenase
no
0.22
2
Psest
_2392
PAS domain S-box/diguanylate cyclase (GGDEF) domain
no
0.22
3
Psest
_1072
TRAP transporter, DctM subunit
no
0.20
4
Psest
_1931
Serine/threonine protein phosphatase
no
0.19
5
Psest
_0860
Glycosidases
no
0.19
6
Psest
_1070
Predicted membrane protein
no
0.19
7
Psest
_2400
Predicted NAD/FAD-binding protein
no
0.19
8
Psest
_0403
lycopene cyclase
no
0.18
9
Psest
_3701
3-oxoacyl-(acyl-carrier-protein) synthase
no
0.18
10
Psest
_0649
Glutamate decarboxylase and related PLP-dependent proteins
no
0.18
11
Psest
_2638
Protein related to penicillin acylase
no
0.18
12
Psest
_2633
choline dehydrogenase
no
0.18
13
Psest
_0371
hypothetical protein
no
0.18
14
Psest
_0395
His Kinase A (phosphoacceptor) domain./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
no
0.18
15
Psest
_2157
trehalose synthase
no
0.18
16
Psest
_0365
NAD dependent epimerase/dehydratase family.
no
0.17
17
Psest
_0392
Signal transduction histidine kinase
no
0.17
18
Psest
_2417
TonB-dependent receptor
no
0.17
19
Psest
_0382
Uncharacterized iron-regulated membrane protein
no
0.17
20
Psest
_4104
formate dehydrogenase, alpha subunit, proteobacterial-type
no
0.17
Or look for
negative cofitness