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Cofit
Top cofit genes for EX31_RS25340 from
Rahnella sp. WP5
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
EX31
_RS03480
pyruvate dehydrogenase (acetyl-transferring), homodimeric type
no
0.87
2
EX31
_RS06070
phosphate ABC transporter substrate-binding protein PstS
no
0.85
3
EX31
_RS06065
phosphate ABC transporter permease PstC
no
0.81
4
EX31
_RS21400
transketolase
no
0.81
5
EX31
_RS06060
phosphate ABC transporter permease PstA
no
0.80
6
EX31
_RS03745
RNA polymerase-associated protein RapA
no
0.80
7
EX31
_RS07595
3-deoxy-7-phosphoheptulonate synthase
no
0.79
8
EX31
_RS19610
4-phosphoerythronate dehydrogenase PdxB
no
0.78
9
EX31
_RS05225
MarR family transcriptional regulator
no
0.78
10
EX31
_RS13275
diaminopimelate decarboxylase
no
0.78
11
EX31
_RS20175
cysteine synthase A
no
0.77
12
EX31
_RS14620
SCP2 domain-containing protein
no
0.77
13
EX31
_RS18530
leucine-responsive transcriptional regulator Lrp
no
0.76
14
EX31
_RS13280
LysR family transcriptional regulator
no
0.76
15
EX31
_RS09890
HTH-type transcriptional regulator CysB
no
0.76
16
EX31
_RS25125
thr operon leader peptide
no
0.76
17
EX31
_RS20530
nucleoside-diphosphate kinase
no
0.76
18
EX31
_RS24410
23S rRNA accumulation protein YceD
no
0.76
19
EX31
_RS07900
assimilatory sulfite reductase (NADPH) hemoprotein subunit
no
0.76
20
EX31
_RS14010
bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA
no
0.76
Or look for
negative cofitness