Top cofit genes for EX31_RS22245 from Rahnella sp. WP5

ATP-dependent Clp endopeptidase proteolytic subunit ClpP
SEED: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
KEGG: ATP-dependent Clp protease, protease subunit

Rank	Hit	Name	Description	Conserved?	Cofitness
1	EX31_RS22250		ATP-dependent protease ATP-binding subunit ClpX	0.94	0.87
2	EX31_RS12400		RNA polymerase factor sigma-54	0.78	0.85
3	EX31_RS08690		translocation/assembly module TamB	no	0.85
4	EX31_RS08695		outer membrane protein assembly factor	no	0.84
5	EX31_RS16860		bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	0.66	0.83
6	EX31_RS20495		outer membrane protein assembly factor BamB	0.77	0.83
7	EX31_RS03945		bifunctional aspartate kinase/homoserine dehydrogenase I	0.70	0.83
8	EX31_RS03250		RNA polymerase-binding protein DksA	0.88	0.83
9	EX31_RS20175		cysteine synthase A	0.72	0.82
10	EX31_RS22625		5-(carboxyamino)imidazole ribonucleotide mutase	0.77	0.82
11	EX31_RS18540		cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	0.86	0.82
12	EX31_RS09970		bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	0.71	0.81
13	EX31_RS02530		ABC transporter ATP-binding protein	0.58	0.81
14	EX31_RS09965		anthranilate phosphoribosyltransferase	0.93	0.81
15	EX31_RS06200		FadR family transcriptional regulator	0.88	0.81
16	EX31_RS24385		dihydroorotase	0.69	0.81
17	EX31_RS06065		phosphate ABC transporter permease PstC	0.37	0.81
18	EX31_RS09855		orotidine-5'-phosphate decarboxylase	0.73	0.81
19	EX31_RS09980		tryptophan synthase subunit alpha	0.71	0.81
20	EX31_RS02515		PAS domain-containing protein	0.61	0.80

Or look for negative cofitness