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  • Top cofit genes for EX31_RS22235 from Rahnella sp. WP5

    transcriptional regulator BolA
    SEED: Cell division protein BolA
    KEGG: BolA protein

    Rank Hit Name Description Conserved? Cofitness  
    1 EX31_RS14010 bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA 0.78 0.63
    2 EX31_RS12460 BolA family transcriptional regulator 0.54 0.63
    3 EX31_RS14295 DUF1454 family protein 0.64 0.63
    4 EX31_RS25125 thr operon leader peptide no 0.62
    5 EX31_RS19600 tRNA pseudouridine(38-40) synthase TruA 0.45 0.61
    6 EX31_RS03480 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.70 0.61
    7 EX31_RS15010 threonine ammonia-lyase, biosynthetic 0.37 0.58
    8 EX31_RS07750 glutamate--cysteine ligase 0.33 0.57
    9 EX31_RS01500 transcriptional regulator no 0.57
    10 EX31_RS07805 nicotinamide-nucleotide amidase 0.53 0.57
    11 EX31_RS04925 Fe-S biogenesis protein NfuA 0.36 0.57
    12 EX31_RS14200 phosphoenolpyruvate carboxylase 0.48 0.56
    13 EX31_RS14620 SCP2 domain-containing protein no 0.56
    14 EX31_RS20175 cysteine synthase A 0.50 0.56
    15 EX31_RS08130 accessory factor UbiK family protein no 0.56
    16 EX31_RS14015 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase 0.70 0.56
    17 EX31_RS09895 type I DNA topoisomerase no 0.55
    18 EX31_RS03945 bifunctional aspartate kinase/homoserine dehydrogenase I 0.43 0.55
    19 EX31_RS22250 ATP-dependent protease ATP-binding subunit ClpX no 0.54
    20 EX31_RS13275 diaminopimelate decarboxylase 0.52 0.54

    Or look for negative cofitness