Top cofit genes for EX31_RS21750 from Rahnella sp. WP5

RnfH family protein
SEED: UPF0125 protein yfjF
KEGG: hypothetical protein

Rank Hit Name Description Conserved? Cofitness  
1 EX31_RS12400 RNA polymerase factor sigma-54 no 0.73
2 EX31_RS22245 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no 0.72
3 EX31_RS18540 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD 0.39 0.72
4 EX31_RS02530 ABC transporter ATP-binding protein no 0.72
5 EX31_RS02515 PAS domain-containing protein no 0.70
6 EX31_RS14990 acetolactate synthase 2 catalytic subunit no 0.70
7 EX31_RS09895 type I DNA topoisomerase 0.31 0.70
8 EX31_RS08695 outer membrane protein assembly factor 0.31 0.69
9 EX31_RS22120 transcriptional regulator NrdR 0.85 0.69
10 EX31_RS20220 sulfate/thiosulfate ABC transporter permease CysT 0.57 0.69
11 EX31_RS22250 ATP-dependent protease ATP-binding subunit ClpX 0.77 0.69
12 EX31_RS07560 ATP-dependent chaperone ClpB 0.65 0.69
13 EX31_RS02520 sigma-54-dependent Fis family transcriptional regulator no 0.68
14 EX31_RS23205 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.95 0.68
15 EX31_RS08690 translocation/assembly module TamB 0.31 0.67
16 EX31_RS21815 SoxR-reducing system protein RseC 0.87 0.67
17 EX31_RS20530 nucleoside-diphosphate kinase no 0.67
18 EX31_RS20210 sulfate/thiosulfate ABC transporter ATP-binding protein CysA no 0.67
19 EX31_RS06150 transcriptional regulator AsnC 0.57 0.67
20 EX31_RS06055 phosphate ABC transporter ATP-binding protein PstB no 0.66

Or look for negative cofitness