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Cofit
Protein
Homologs
Top cofit genes for EX31_RS18295 from
Rahnella sp. WP5
phage major tail tube protein
SEED: Phage major tail tube protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
EX31
_RS04155
GGDEF domain-containing protein
no
0.44
2
EX31
_RS23570
galactokinase
no
0.41
3
EX31
_RS17315
VOC family protein
no
0.40
4
EX31
_RS01050
ROK family protein
no
0.39
5
EX31
_RS00765
alpha/beta hydrolase
no
0.39
6
EX31
_RS19120
bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase
no
0.38
7
EX31
_RS06315
DNA topoisomerase III
no
0.38
8
EX31
_RS14085
transglycosylase SLT domain-containing protein
no
0.38
9
EX31
_RS16660
TetR/AcrR family transcriptional regulator
no
0.37
10
EX31
_RS15590
methionine ABC transporter ATP-binding protein
no
0.37
11
EX31
_RS22435
Hha toxicity modulator TomB
no
0.37
12
EX31
_RS04240
LysR family transcriptional regulator
no
0.37
13
EX31
_RS14140
tRNA (uridine(54)-C5)-methyltransferase TrmA
no
0.37
14
EX31
_RS15890
Der GTPase-activating protein YihI
no
0.36
15
EX31
_RS08700
peptide-methionine (S)-S-oxide reductase MsrA
no
0.36
16
EX31
_RS10270
alpha-glucosidase
no
0.36
17
EX31
_RS14470
JAB domain-containing protein
no
0.35
18
EX31
_RS21445
oxidative stress defense protein
no
0.35
19
EX31
_RS05110
MFS transporter
no
0.35
20
EX31
_RS20665
MFS transporter
no
0.35
Or look for
negative cofitness