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  • Top cofit genes for EX31_RS16705 from Rahnella sp. WP5

    ABC transporter permease
    SEED: Glycine betaine ABC transport system permease protein
    KEGG: osmoprotectant transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 EX31_RS15475 4-oxalocrotonate tautomerase family protein no 0.40
    2 EX31_RS02305 cytochrome c no 0.40
    3 EX31_RS08760 esterase no 0.39
    4 EX31_RS25075 KTSC domain-containing protein no 0.38
    5 EX31_RS00830 ABC transporter ATP-binding protein no 0.37
    6 EX31_RS03365 multicopper oxidase CueO no 0.36
    7 EX31_RS05270 carbonic anhydrase no 0.36
    8 EX31_RS17650 LysR family transcriptional regulator no 0.35
    9 EX31_RS23025 DUF2076 domain-containing protein no 0.34
    10 EX31_RS00220 Fic family protein no 0.34
    11 EX31_RS19615 helix-turn-helix transcriptional regulator no 0.34
    12 EX31_RS09580 flagellar motor switch protein FliN no 0.34
    13 EX31_RS04675 nitrite reductase small subunit NirD no 0.33
    14 EX31_RS11120 ABC transporter substrate-binding protein no 0.33
    15 EX31_RS01180 two-component system response regulator DcuR no 0.33
    16 EX31_RS06410 FadR family transcriptional regulator no 0.33
    17 EX31_RS25410 transposase no 0.33
    18 EX31_RS22605 multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1 no 0.33
    19 EX31_RS23015 S9 family peptidase no 0.33
    20 EX31_RS17090 IS110 family transposase no 0.32

    Or look for negative cofitness