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Cofit
Protein
Homologs
Top cofit genes for EX31_RS13490 from
Rahnella sp. WP5
membrane protein
SEED: Putative inner membrane protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
EX31
_RS04120
16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC
no
0.56
2
EX31
_RS02015
TetR family transcriptional regulator
no
0.55
3
EX31
_RS05780
formate dehydrogenase accessory sulfurtransferase FdhD
0.54
0.55
4
EX31
_RS13645
transcriptional repressor MprA
no
0.55
5
EX31
_RS18765
molybdopterin molybdotransferase MoeA
0.49
0.54
6
EX31
_RS18890
outer membrane protein OmpX
0.43
0.54
7
EX31
_RS13770
glycine zipper 2TM domain-containing protein
0.49
0.54
8
EX31
_RS08530
tRNA pseudouridine(55) synthase TruB
0.61
0.54
9
EX31
_RS12180
tRNA dihydrouridine synthase DusB
no
0.54
10
EX31
_RS20955
tRNA-Thr
no
0.53
11
EX31
_RS10935
transcription antiterminator/RNA stability regulator CspE
no
0.52
12
EX31
_RS24410
23S rRNA accumulation protein YceD
no
0.52
13
EX31
_RS00530
ParD-like family protein
no
0.52
14
EX31
_RS20105
tRNA-Val
no
0.52
15
EX31
_RS17380
tRNA-Ser
no
0.52
16
EX31
_RS24405
septum formation inhibitor Maf
no
0.52
17
EX31
_RS09675
porin OmpC
0.83
0.51
18
EX31
_RS22210
cytochrome o ubiquinol oxidase subunit III
0.56
0.51
19
EX31
_RS01435
TetR/AcrR family transcriptional regulator
no
0.51
20
EX31
_RS07570
23S rRNA pseudouridine(1911/1915/1917) synthase RluD
0.71
0.51
Or look for
negative cofitness