Top cofit genes for EX31_RS12540 from Rahnella sp. WP5

YraN family protein
SEED: Predicted endonuclease distantly related to archaeal Holliday junction resolvase
KEGG: putative endonuclease

Rank	Hit	Name	Description	Conserved?	Cofitness
1	EX31_RS04230		diguanylate cyclase	no	0.43
2	EX31_RS06990		GntR family transcriptional regulator	no	0.35
3	EX31_RS02185		glycoside hydrolase family 31 protein	no	0.33
4	EX31_RS09020		fimbrial protein	no	0.31
5	EX31_RS02110		L-rhamnose mutarotase	no	0.31
6	EX31_RS08485		U32 family peptidase	0.42	0.30
7	EX31_RS15240		filamentous hemagglutinin	no	0.30
8	EX31_RS23375		type 2 GTP cyclohydrolase I	0.43	0.30
9	EX31_RS09015		helix-turn-helix transcriptional regulator	0.55	0.30
10	EX31_RS22335		MGMT family protein	0.75	0.30
11	EX31_RS02865		GDP-mannose 4,6-dehydratase	no	0.30
12	EX31_RS03805		threonine/serine exporter ThrE family protein	no	0.29
13	EX31_RS21360		fimbrial protein	no	0.29
14	EX31_RS10540		glycosyltransferase family 2 protein	0.29	0.29
15	EX31_RS05090		pirin family protein	0.39	0.29
16	EX31_RS22600		SDR family oxidoreductase	0.11	0.29
17	EX31_RS14555		IMPACT family protein	0.49	0.29
18	EX31_RS07615		replication endonuclease	no	0.29
19	EX31_RS02955		YjbF family lipoprotein	0.48	0.29
20	EX31_RS17460		putative selenoprotein	no	0.29

Or look for negative cofitness