Top cofit genes for EX31_RS12475 from Rahnella sp. WP5

Do family serine endopeptidase
SEED: Outer membrane stress sensor protease DegQ, serine protease
KEGG: serine protease DegQ

Rank	Hit	Name	Description	Conserved?	Cofitness
1	EX31_RS21810		sigma-E factor regulatory protein RseB	0.42	0.52
2	EX31_RS05450		biofilm formation regulator HmsP	0.51	0.46
3	EX31_RS15070		UDP-N-acetyl-D-mannosamine dehydrogenase	0.17	0.45
4	EX31_RS03650		division/cell wall cluster transcriptional repressor MraZ	0.70	0.45
5	EX31_RS15100		lipopolysaccharide N-acetylmannosaminouronosyltransferase	0.45	0.39
6	EX31_RS03505		beta-lactamase regulator AmpE	no	0.39
7	EX31_RS22430		hemolysin expression modulator Hha	no	0.38
8	EX31_RS14370		divergent polysaccharide deacetylase family protein	0.35	0.38
9	EX31_RS22080		peroxiredoxin C	0.44	0.38
10	EX31_RS15065		UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	0.69	0.36
11	EX31_RS04225		YfiR family protein	no	0.36
12	EX31_RS23170		amino acid ABC transporter permease	no	0.36
13	EX31_RS14250		1,4-dihydroxy-2-naphthoate polyprenyltransferase	0.69	0.36
14	EX31_RS10080		thymidine kinase	0.51	0.35
15	EX31_RS03490		aromatic amino acid transporter AroP	0.61	0.35
16	EX31_RS15885		oxygen-independent coproporphyrinogen III oxidase	no	0.34
17	EX31_RS08995		MFS transporter	no	0.34
18	EX31_RS19115		phosphatase PAP2 family protein	no	0.34
19	EX31_RS19065		PTS fructose transporter subunit IIBC	no	0.33
20	EX31_RS15080		dTDP-4-amino-4,6-dideoxygalactose transaminase	0.56	0.33

Or look for negative cofitness