Top cofit genes for EX31_RS12265 from Rahnella sp. WP5

metalloprotease TldD
SEED: TldD protein, part of TldE/TldD proteolytic complex
KEGG: TldD protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	EX31_RS11755		glyoxylate bypass operon transcriptional repressor IclR	0.73	0.46
2	EX31_RS16820		Rsd/AlgQ family anti-sigma factor	0.31	0.44
3	EX31_RS08655		peroxide/acid stress response protein YhcN	no	0.44
4	EX31_RS14965		sugar ABC transporter permease YjfF	no	0.42
5	EX31_RS06170		D-ribose pyranase	0.64	0.41
6	EX31_RS21665		GNAT family N-acetyltransferase	no	0.40
7	EX31_RS05215		peptidylprolyl isomerase	no	0.39
8	EX31_RS12170		DoxX family protein	no	0.39
9	EX31_RS06195		ribose operon transcriptional repressor RbsR	0.75	0.39
10	EX31_RS25380		hypothetical protein	no	0.39
11	EX31_RS22595		co-chaperone YbbN	0.53	0.39
12	EX31_RS16840		YjaG family protein	no	0.38
13	EX31_RS06190		ribokinase	0.53	0.38
14	EX31_RS08175		glycerol-3-phosphate 1-O-acyltransferase PlsY	0.31	0.38
15	EX31_RS11815		glucose-6-phosphate isomerase	0.26	0.37
16	EX31_RS07200		FNR family transcription factor	0.63	0.37
17	EX31_RS05895		LacI family DNA-binding transcriptional regulator	no	0.37
18	EX31_RS05455		hypothetical protein	no	0.36
19	EX31_RS06260		protein kinase YeaG	0.49	0.36
20	EX31_RS16850		DUF1481 domain-containing protein	no	0.36

Or look for negative cofitness