Top cofit genes for EX31_RS11410 from Rahnella sp. WP5

flagellar motor protein MotB
SEED: Flagellar motor rotation protein MotB
KEGG: chemotaxis protein MotB

Rank	Hit	Name	Description	Conserved?	Cofitness
1	EX31_RS09450		RNA polymerase sigma factor FliA	0.97	0.81
2	EX31_RS11300		flagellar hook protein FlgE	0.97	0.80
3	EX31_RS11270		flagellar hook-associated protein FlgK	0.48	0.77
4	EX31_RS09540		flagellar basal body M-ring protein FliF	0.98	0.76
5	EX31_RS11305		flagellar hook assembly protein FlgD	0.96	0.74
6	EX31_RS11330		flagellar synthesis chaperone protein FlgN	0.95	0.73
7	EX31_RS11285		flagellar basal body L-ring protein FlgH	0.96	0.72
8	EX31_RS11360		chemotaxis response regulator protein-glutamate methylesterase	0.96	0.71
9	EX31_RS11310		flagellar basal body rod protein FlgC	0.94	0.71
10	EX31_RS11415		flagellar motor stator protein MotA	0.99	0.70
11	EX31_RS11425		flagellar transcriptional regulator FlhD	0.95	0.68
12	EX31_RS09555		flagellum-specific ATP synthase FliI	0.97	0.67
13	EX31_RS13280		LysR family transcriptional regulator	no	0.67
14	EX31_RS11420		flagellar transcriptional regulator FlhC	0.95	0.66
15	EX31_RS09465		flagellar export chaperone FliS	0.96	0.65
16	EX31_RS11350		protein phosphatase CheZ	0.95	0.63
17	EX31_RS09460		flagellar filament capping protein FliD	0.94	0.63
18	EX31_RS09575		flagellar motor switch protein FliM	0.99	0.63
19	EX31_RS11340		flagellar biosynthesis protein FlhA	0.96	0.63
20	EX31_RS09560		flagella biosynthesis chaperone FliJ	0.97	0.62

Or look for negative cofitness