Top cofit genes for EX31_RS09895 from Rahnella sp. WP5

type I DNA topoisomerase
SEED: DNA topoisomerase I (EC 5.99.1.2)
KEGG: DNA topoisomerase I

Rank	Hit	Name	Description	Conserved?	Cofitness
1	EX31_RS18540		cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	0.33	0.84
2	EX31_RS20210		sulfate/thiosulfate ABC transporter ATP-binding protein CysA	no	0.82
3	EX31_RS12400		RNA polymerase factor sigma-54	no	0.82
4	EX31_RS02515		PAS domain-containing protein	no	0.81
5	EX31_RS03480		pyruvate dehydrogenase (acetyl-transferring), homodimeric type	no	0.81
6	EX31_RS22250		ATP-dependent protease ATP-binding subunit ClpX	0.82	0.79
7	EX31_RS02520		sigma-54-dependent Fis family transcriptional regulator	0.25	0.77
8	EX31_RS02530		ABC transporter ATP-binding protein	no	0.77
9	EX31_RS20220		sulfate/thiosulfate ABC transporter permease CysT	no	0.75
10	EX31_RS21815		SoxR-reducing system protein RseC	no	0.75
11	EX31_RS14295		DUF1454 family protein	no	0.74
12	EX31_RS23440		2-oxoglutarate dehydrogenase E1 component	no	0.74
13	EX31_RS07560		ATP-dependent chaperone ClpB	0.71	0.73
14	EX31_RS20495		outer membrane protein assembly factor BamB	no	0.73
15	EX31_RS19425		NADH-quinone oxidoreductase subunit C/D	0.40	0.73
16	EX31_RS14010		bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA	0.63	0.73
17	EX31_RS06055		phosphate ABC transporter ATP-binding protein PstB	0.24	0.73
18	EX31_RS09675		porin OmpC	no	0.73
19	EX31_RS22245		ATP-dependent Clp endopeptidase proteolytic subunit ClpP	0.85	0.73
20	EX31_RS14990		acetolactate synthase 2 catalytic subunit	no	0.73

Or look for negative cofitness