Top cofit genes for EX31_RS09600 from Rahnella sp. WP5

flagellar type III secretion system protein FliR
SEED: Flagellar biosynthesis protein FliR
KEGG: flagellar biosynthetic protein FliR

Rank	Hit	Name	Description	Conserved?	Cofitness
1	EX31_RS09455		FliC/FljB family flagellin	0.91	0.61
2	EX31_RS11345		flagellar type III secretion system protein FlhB	1.00	0.58
3	EX31_RS11295		flagellar basal body rod protein FlgF	0.99	0.58
4	EX31_RS11320		flagellar basal body P-ring formation protein FlgA	0.86	0.56
5	EX31_RS11275		flagellar assembly peptidoglycan hydrolase FlgJ	0.99	0.53
6	EX31_RS11280		flagellar basal body P-ring protein FlgI	0.99	0.53
7	EX31_RS09555		flagellum-specific ATP synthase FliI	1.00	0.51
8	EX31_RS11300		flagellar hook protein FlgE	0.99	0.50
9	EX31_RS09540		flagellar basal body M-ring protein FliF	1.00	0.50
10	EX31_RS11340		flagellar biosynthesis protein FlhA	1.00	0.49
11	EX31_RS11525		UTP--glucose-1-phosphate uridylyltransferase GalU	0.39	0.48
12	EX31_RS02685		YggS family pyridoxal phosphate-dependent enzyme	no	0.48
13	EX31_RS11310		flagellar basal body rod protein FlgC	0.98	0.48
14	EX31_RS08140		bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE	no	0.47
15	EX31_RS11425		flagellar transcriptional regulator FlhD	0.97	0.46
16	EX31_RS09575		flagellar motor switch protein FliM	0.99	0.45
17	EX31_RS14405		lipopolysaccharide heptosyltransferase RfaC	no	0.45
18	EX31_RS11290		flagellar basal-body rod protein FlgG	0.99	0.45
19	EX31_RS11285		flagellar basal body L-ring protein FlgH	0.99	0.45
20	EX31_RS11265		flagellar hook-filament junction protein FlgL	0.97	0.44

Or look for negative cofitness