Top cofit genes for EX31_RS09465 from Rahnella sp. WP5

flagellar export chaperone FliS
SEED: Flagellar biosynthesis protein FliS
KEGG: flagellar protein FliS

Rank	Hit	Name	Description	Conserved?	Cofitness
1	EX31_RS11305		flagellar hook assembly protein FlgD	0.95	0.68
2	EX31_RS09450		RNA polymerase sigma factor FliA	0.97	0.67
3	EX31_RS09575		flagellar motor switch protein FliM	0.98	0.66
4	EX31_RS11300		flagellar hook protein FlgE	0.94	0.66
5	EX31_RS11270		flagellar hook-associated protein FlgK	0.70	0.65
6	EX31_RS11410		flagellar motor protein MotB	0.96	0.65
7	EX31_RS11285		flagellar basal body L-ring protein FlgH	0.98	0.65
8	EX31_RS09460		flagellar filament capping protein FliD	0.96	0.64
9	EX31_RS09540		flagellar basal body M-ring protein FliF	0.99	0.64
10	EX31_RS11340		flagellar biosynthesis protein FlhA	0.97	0.63
11	EX31_RS11425		flagellar transcriptional regulator FlhD	0.98	0.63
12	EX31_RS11310		flagellar basal body rod protein FlgC	0.94	0.63
13	EX31_RS11415		flagellar motor stator protein MotA	0.97	0.63
14	EX31_RS13280		LysR family transcriptional regulator	no	0.60
15	EX31_RS11420		flagellar transcriptional regulator FlhC	0.96	0.60
16	EX31_RS09555		flagellum-specific ATP synthase FliI	0.98	0.59
17	EX31_RS11265		flagellar hook-filament junction protein FlgL	0.90	0.58
18	EX31_RS04485		peptidylprolyl isomerase	no	0.57
19	EX31_RS07595		3-deoxy-7-phosphoheptulonate synthase	0.39	0.55
20	EX31_RS09570		flagellar basal body-associated protein FliL	0.98	0.55

Or look for negative cofitness