Top cofit genes for EX31_RS09450 from Rahnella sp. WP5

RNA polymerase sigma factor FliA
SEED: RNA polymerase sigma factor for flagellar operon
KEGG: RNA polymerase sigma factor for flagellar operon FliA

Rank	Hit	Name	Description	Conserved?	Cofitness
1	EX31_RS11300		flagellar hook protein FlgE	0.99	0.86
2	EX31_RS11425		flagellar transcriptional regulator FlhD	0.96	0.83
3	EX31_RS09540		flagellar basal body M-ring protein FliF	0.99	0.81
4	EX31_RS11410		flagellar motor protein MotB	0.97	0.81
5	EX31_RS11310		flagellar basal body rod protein FlgC	0.98	0.80
6	EX31_RS11285		flagellar basal body L-ring protein FlgH	0.98	0.80
7	EX31_RS11420		flagellar transcriptional regulator FlhC	0.97	0.79
8	EX31_RS09555		flagellum-specific ATP synthase FliI	0.99	0.78
9	EX31_RS11340		flagellar biosynthesis protein FlhA	0.99	0.77
10	EX31_RS11415		flagellar motor stator protein MotA	0.97	0.77
11	EX31_RS11270		flagellar hook-associated protein FlgK	0.79	0.76
12	EX31_RS11330		flagellar synthesis chaperone protein FlgN	0.94	0.76
13	EX31_RS09460		flagellar filament capping protein FliD	0.96	0.74
14	EX31_RS11295		flagellar basal body rod protein FlgF	0.99	0.71
15	EX31_RS11305		flagellar hook assembly protein FlgD	0.98	0.71
16	EX31_RS11360		chemotaxis response regulator protein-glutamate methylesterase	0.95	0.71
17	EX31_RS13280		LysR family transcriptional regulator	no	0.71
18	EX31_RS07595		3-deoxy-7-phosphoheptulonate synthase	no	0.70
19	EX31_RS01760		hypothetical protein	no	0.67
20	EX31_RS09545		flagellar motor switch protein FliG	0.98	0.67

Or look for negative cofitness