Top cofit genes for EX31_RS04105 from Rahnella sp. WP5

helix-turn-helix domain-containing protein
SEED: transcriptional regulator, XRE family

Rank	Hit	Name	Description	Conserved?	Cofitness
1	EX31_RS04710		adenine-specific DNA-methyltransferase	no	0.58
2	EX31_RS04485		peptidylprolyl isomerase	no	0.56
3	EX31_RS21470		phosphoglycerate dehydrogenase	no	0.55
4	EX31_RS06020		hypothetical protein	no	0.54
5	EX31_RS12785		aspartate carbamoyltransferase	no	0.54
6	EX31_RS04035		phosphoserine phosphatase	no	0.53
7	EX31_RS18255		3-phosphoserine/phosphohydroxythreonine transaminase	no	0.53
8	EX31_RS18095		quinone-dependent dihydroorotate dehydrogenase	no	0.52
9	EX31_RS07590		bifunctional chorismate mutase/prephenate dehydrogenase	no	0.52
10	EX31_RS14500		orotate phosphoribosyltransferase	no	0.52
11	EX31_RS03835		glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	no	0.52
12	EX31_RS15910		thiol:disulfide interchange protein DsbA	no	0.52
13	EX31_RS11455		imidazole glycerol phosphate synthase subunit HisH	no	0.51
14	EX31_RS20975		glutamate-5-semialdehyde dehydrogenase	no	0.51
15	EX31_RS08785		ribonuclease R	no	0.51
16	EX31_RS23500		peptidoglycan-associated lipoprotein Pal	no	0.51
17	EX31_RS20980		glutamate 5-kinase	no	0.51
18	EX31_RS23270		PTS transporter subunit EIIC	no	0.51
19	EX31_RS16855		phosphoribosylamine--glycine ligase	no	0.50
20	EX31_RS07955		GTP diphosphokinase	no	0.50

Or look for negative cofitness