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Cofit
Protein
Homologs
Top cofit genes for EX31_RS03810 from
Rahnella sp. WP5
LysE family translocator
SEED: Threonine efflux protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
EX31
_RS16320
conjugal transfer protein TraT
no
0.43
2
EX31
_RS15830
sodium/glutamate symporter
no
0.39
3
EX31
_RS09750
sugar ABC transporter permease
no
0.39
4
EX31
_RS07430
transporter substrate-binding domain-containing protein
no
0.37
5
EX31
_RS05915
xylose isomerase
no
0.36
6
EX31
_RS08285
maltoporin
0.32
0.36
7
EX31
_RS03390
drug/metabolite DMT transporter permease
no
0.36
8
EX31
_RS04075
patatin family protein
no
0.36
9
EX31
_RS02985
efflux RND transporter permease subunit
no
0.35
10
EX31
_RS06750
ABC transporter ATP-binding protein
no
0.35
11
EX31
_RS09920
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
no
0.34
12
EX31
_RS05420
AsmA family protein
0.31
0.34
13
EX31
_RS19920
hydrogenase large subunit
no
0.34
14
EX31
_RS17310
putative C-S lyase
no
0.34
15
EX31
_RS12535
DnaA initiator-associating protein DiaA
0.30
0.34
16
EX31
_RS14150
MFS transporter
0.42
0.34
17
EX31
_RS12080
molybdate ABC transporter substrate-binding protein
no
0.33
18
EX31
_RS23305
LexA regulated protein
no
0.33
19
EX31
_RS14230
DNA-binding transcriptional regulator CytR
0.60
0.33
20
EX31
_RS13570
class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI
no
0.33
Or look for
negative cofitness