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Cofit
Protein
Homologs
Top cofit genes for EX31_RS03085 from
Rahnella sp. WP5
hypothetical protein
SEED: Putative membrane protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
EX31
_RS12400
RNA polymerase factor sigma-54
no
0.69
2
EX31
_RS18540
cysteine/glutathione ABC transporter permease/ATP-binding protein CydD
no
0.69
3
EX31
_RS02520
sigma-54-dependent Fis family transcriptional regulator
no
0.68
4
EX31
_RS14295
DUF1454 family protein
no
0.66
5
EX31
_RS02515
PAS domain-containing protein
no
0.66
6
EX31
_RS02530
ABC transporter ATP-binding protein
no
0.65
7
EX31
_RS04055
phosphopentomutase
no
0.64
8
EX31
_RS14160
HTH-type transcriptional repressor FabR
no
0.64
9
EX31
_RS15015
HTH-type transcriptional activator IlvY
no
0.62
10
EX31
_RS09965
anthranilate phosphoribosyltransferase
no
0.62
11
EX31
_RS20175
cysteine synthase A
no
0.62
12
EX31
_RS22250
ATP-dependent protease ATP-binding subunit ClpX
no
0.62
13
EX31
_RS13280
LysR family transcriptional regulator
no
0.62
14
EX31
_RS03945
bifunctional aspartate kinase/homoserine dehydrogenase I
no
0.61
15
EX31
_RS03480
pyruvate dehydrogenase (acetyl-transferring), homodimeric type
no
0.61
16
EX31
_RS12440
lipid asymmetry maintenance ABC transporter permease subunit MlaE
no
0.60
17
EX31
_RS22740
4-hydroxy-tetrahydrodipicolinate synthase
no
0.60
18
EX31
_RS09895
type I DNA topoisomerase
no
0.60
19
EX31
_RS09980
tryptophan synthase subunit alpha
no
0.60
20
EX31
_RS06160
ATPase RavA
no
0.60
Or look for
negative cofitness