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Cofit
Protein
Homologs
Top cofit genes for EX31_RS02520 from
Rahnella sp. WP5
sigma-54-dependent Fis family transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
EX31
_RS02515
PAS domain-containing protein
0.98
0.93
2
EX31
_RS12400
RNA polymerase factor sigma-54
0.40
0.93
3
EX31
_RS18540
cysteine/glutathione ABC transporter permease/ATP-binding protein CydD
0.34
0.93
4
EX31
_RS02530
ABC transporter ATP-binding protein
0.97
0.91
5
EX31
_RS22740
4-hydroxy-tetrahydrodipicolinate synthase
no
0.88
6
EX31
_RS20175
cysteine synthase A
0.53
0.84
7
EX31
_RS06160
ATPase RavA
0.71
0.84
8
EX31
_RS20495
outer membrane protein assembly factor BamB
no
0.84
9
EX31
_RS22250
ATP-dependent protease ATP-binding subunit ClpX
0.57
0.83
10
EX31
_RS21815
SoxR-reducing system protein RseC
no
0.83
11
EX31
_RS20210
sulfate/thiosulfate ABC transporter ATP-binding protein CysA
0.46
0.81
12
EX31
_RS13280
LysR family transcriptional regulator
0.51
0.81
13
EX31
_RS03480
pyruvate dehydrogenase (acetyl-transferring), homodimeric type
0.33
0.81
14
EX31
_RS08695
outer membrane protein assembly factor
0.26
0.81
15
EX31
_RS22120
transcriptional regulator NrdR
no
0.81
16
EX31
_RS03945
bifunctional aspartate kinase/homoserine dehydrogenase I
no
0.81
17
EX31
_RS20530
nucleoside-diphosphate kinase
no
0.81
18
EX31
_RS07560
ATP-dependent chaperone ClpB
0.68
0.80
19
EX31
_RS03890
Na+/H+ antiporter NhaA
no
0.80
20
EX31
_RS15015
HTH-type transcriptional activator IlvY
no
0.80
Or look for
negative cofitness