Top cofit genes for EX31_RS00865 from Rahnella sp. WP5

ABC transporter permease
SEED: ABC transport system, permease component YbhR
KEGG: antibiotic transport system permease protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	EX31_RS04340		tyrosine-type recombinase/integrase	no	0.43
2	EX31_RS04160		L-rhamnose/proton symporter RhaT	0.49	0.41
3	EX31_RS15605		ABC transporter ATP-binding protein	no	0.41
4	EX31_RS05705		GNAT family N-acetyltransferase	no	0.40
5	EX31_RS16860		bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	no	0.39
6	EX31_RS06425		family 78 glycoside hydrolase catalytic domain	no	0.38
7	EX31_RS16855		phosphoribosylamine--glycine ligase	no	0.38
8	EX31_RS11080		isopenicillin N synthase family oxygenase	no	0.38
9	EX31_RS12545		penicillin-binding protein activator	no	0.38
10	EX31_RS09470		flagella biosynthesis regulatory protein FliT	0.29	0.38
11	EX31_RS22625		5-(carboxyamino)imidazole ribonucleotide mutase	no	0.37
12	EX31_RS20530		nucleoside-diphosphate kinase	no	0.37
13	EX31_RS09790		autoinducer 2 ABC transporter permease LsrD	no	0.37
14	EX31_RS04750		peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA	no	0.37
15	EX31_RS13675		DTW domain-containing protein	no	0.37
16	EX31_RS22695		phosphoribosylformylglycinamidine cyclo-ligase	0.29	0.37
17	EX31_RS21510		glycine cleavage system aminomethyltransferase GcvT	0.40	0.37
18	EX31_RS19610		4-phosphoerythronate dehydrogenase PdxB	no	0.36
19	EX31_RS03250		RNA polymerase-binding protein DksA	0.51	0.36
20	EX31_RS08690		translocation/assembly module TamB	0.16	0.36

Or look for negative cofitness