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Cofit
Top cofit genes for ECOLIN_RS28330 from
Escherichia coli Nissle 1917
YkgJ family cysteine cluster protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
ECOLIN
_RS23345
CsbD family protein
no
0.46
2
ECOLIN
_RS21020
hypothetical protein
no
0.46
3
ECOLIN
_RS14385
alpha/beta hydrolase
no
0.43
4
ECOLIN
_RS15285
DNA-binding transcriptional repressor YgbI
no
0.42
5
ECOLIN
_RS24640
YfcC family protein
no
0.41
6
ECOLIN
_RS02870
glutaminase A
no
0.40
7
ECOLIN
_RS23290
maltose/maltodextrin ABC transporter substrate-binding protein MalE
no
0.39
8
ECOLIN
_RS01990
reactive chlorine resistance oxidoreductase RclA
no
0.39
9
ECOLIN
_RS04430
EAL domain-containing protein
no
0.39
10
ECOLIN
_RS20845
fructose PTS transporter subunit IIB
no
0.39
11
ECOLIN
_RS18640
MDR family oxidoreductase
no
0.38
12
ECOLIN
_RS22550
CDF family cation-efflux transporter FieF
no
0.38
13
ECOLIN
_RS22410
hypothetical protein
no
0.37
14
ECOLIN
_RS00605
type VI secretion system tube protein TssD
no
0.36
15
ECOLIN
_RS18080
galactosamine-6-phosphate isomerase
no
0.36
16
ECOLIN
_RS20470
2,3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO
no
0.36
17
ECOLIN
_RS17895
pirin family protein
no
0.35
18
ECOLIN
_RS14910
glutaredoxin-like protein NrdH
no
0.35
19
ECOLIN
_RS15180
hypothetical protein
no
0.34
20
ECOLIN
_RS23415
AAA family ATPase
no
0.34
Or look for
negative cofitness