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Cofit
Protein
Homologs
Top cofit genes for ECOLIN_RS26300 from
Escherichia coli Nissle 1917
site-specific integrase
SEED: putative integrase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
ECOLIN
_RS24475
2',3'-cyclic-nucleotide 2'-phosphodiesterase
no
0.50
2
ECOLIN
_RS21210
sulfatase-like hydrolase/transferase
no
0.50
3
ECOLIN
_RS08145
EntS/YbdA MFS transporter
no
0.49
4
ECOLIN
_RS23210
mannose/fructose/sorbose PTS transporter subunit IIA
no
0.47
5
ECOLIN
_RS19845
7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter
no
0.45
6
ECOLIN
_RS21850
hypothetical protein
no
0.42
7
ECOLIN
_RS17685
L-tartrate/succinate antiporter
no
0.42
8
ECOLIN
_RS23190
L-sorbose 1-phosphate reductase
no
0.41
9
ECOLIN
_RS24495
hemolysin family protein
no
0.41
10
ECOLIN
_RS13025
AIDA-I family autotransporter adhesin YfaL/EhaC
no
0.39
11
ECOLIN
_RS21855
hypothetical protein
no
0.39
12
ECOLIN
_RS23685
D-allose utilization transcriptional regulator AlsR
no
0.39
13
ECOLIN
_RS22165
acetyl-CoA C-acyltransferase FadA
0.71
0.39
14
ECOLIN
_RS19290
YhfL family protein
no
0.37
15
ECOLIN
_RS20420
alpha-amylase
no
0.37
16
ECOLIN
_RS19635
glycogen debranching protein GlgX
no
0.36
17
ECOLIN
_RS32940
small toxic inner membrane protein TimP
no
0.35
18
ECOLIN
_RS19355
cell division protein DamX
no
0.35
19
ECOLIN
_RS23445
succinate--CoA ligase subunit alpha
no
0.35
20
ECOLIN
_RS32885
hypothetical protein
no
0.35
Or look for
negative cofitness