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Cofit
Protein
Homologs
Top cofit genes for ECOLIN_RS23795 from
Escherichia coli Nissle 1917
LpxT activity modulator PmrR
Rank
Hit
Name
Description
Conserved?
Cofitness
1
ECOLIN
_RS16795
putative zinc ribbon protein
no
0.65
2
ECOLIN
_RS22880
M20 aminoacylase family protein
no
0.57
3
ECOLIN
_RS08585
ABC transporter ATP-binding protein/permease
no
0.56
4
ECOLIN
_RS08170
phosphatase PAP2/dual specificity phosphatase family protein
no
0.56
5
ECOLIN
_RS13475
elongation factor P hydroxylase
no
0.53
6
ECOLIN
_RS31295
galactarate dehydratase
no
0.53
7
ECOLIN
_RS11645
TonB-dependent receptor
no
0.51
8
ECOLIN
_RS15350
tRNA pseudouridine(13) synthase TruD
no
0.51
9
ECOLIN
_RS15540
galactarate/glucarate/glycerate transporter GudP
no
0.51
10
ECOLIN
_RS17175
LPS export ABC transporter permease LptG
no
0.51
11
ECOLIN
_RS21190
multidrug efflux MFS transporter EmrD
no
0.50
12
ECOLIN
_RS21220
AraC family transcriptional regulator
no
0.49
13
ECOLIN
_RS17925
2-ketobutyrate formate-lyase/pyruvate formate-lyase
0.49
0.49
14
ECOLIN
_RS18635
RNase E specificity factor CsrD
0.41
0.48
15
ECOLIN
_RS13825
xanthosine/proton symporter XapB
no
0.48
16
ECOLIN
_RS15940
amino acid racemase
no
0.48
17
ECOLIN
_RS08250
YdcK family protein
no
0.48
18
ECOLIN
_RS03245
enterobactin transporter EntS
no
0.48
19
ECOLIN
_RS10040
long-chain-fatty-acid--CoA ligase FadD
no
0.47
20
ECOLIN
_RS16670
hypothetical protein
no
0.47
Or look for
negative cofitness