Top cofit genes for ECOLIN_RS19765 from Escherichia coli Nissle 1917

branched chain amino acid ABC transporter permease LivM
SEED: Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system permease protein

Rank Hit Name Description Conserved? Cofitness  
1 ECOLIN_RS01965 inverse autotransporter adhesin FdeC no 0.63
2 ECOLIN_RS23825 arginine decarboxylase 0.77 0.61
3 ECOLIN_RS24330 L-ascorbate 6-phosphate lactonase 0.60 0.57
4 ECOLIN_RS20140 LysR family transcriptional regulator no 0.56
5 ECOLIN_RS07220 TonB-dependent receptor no 0.54
6 ECOLIN_RS23760 phosphonate ABC transporter substrate-binding protein no 0.54
7 ECOLIN_RS09620 6-phosphofructokinase II 0.57 0.53
8 ECOLIN_RS16610 DUF417 family protein no 0.53
9 ECOLIN_RS18750 multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.41 0.52
10 ECOLIN_RS02195 DNA-binding transcriptional repressor LacI no 0.51
11 ECOLIN_RS21160 transcriptional regulator UhpA no 0.50
12 ECOLIN_RS00895 serine endoprotease DegP 0.37 0.49
13 ECOLIN_RS16205 5-formyltetrahydrofolate cyclo-ligase 0.90 0.49
14 ECOLIN_RS22545 cell-envelope stress modulator CpxP no 0.49
15 ECOLIN_RS23210 mannose/fructose/sorbose PTS transporter subunit IIA no 0.49
16 ECOLIN_RS15700 type VI secretion system contractile sheath large subunit no 0.48
17 ECOLIN_RS05230 YccJ family protein no 0.47
18 ECOLIN_RS11290 hypothetical protein no 0.47
19 ECOLIN_RS00045 transaldolase 0.87 0.47
20 ECOLIN_RS19190 glutathione-regulated potassium-efflux system protein KefB no 0.46

Or look for negative cofitness